Strategic Project - UI 100 - 2013-2014

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Publications

Use of organomolybdenum compounds for promoted hydrolysis of phosphoester bonds in aqueous media

Publication . Gamelas ou Carla A. Gamelas, Carla; Gomes, Ana C.; Fernandes, José A.; Paz, Filipe A. Almeida; Nunes, Patrique; Pillinger, Martyn; Gonçalves, Isabel S.; Romão, Carlos C.; Abrantes, Marta

2016-09Conference object

Open access

Application of an Indenyl Molybdenum Dicarbonyl Complex in the Isomerisation of α-Pinene Oxide to Campholenic Aldehyde

Publication . Bruno, S.; Gomes, A. C.; Gamelas ou Carla A. Gamelas, Carla; Abrantes, M.; Oliveira, M. C.; Valente, A.; Almeida-Paz, Filipe; Pillinger, M.; Romão, C.; Gonçalves, I.

The complex [{(Z5-Ind)Mo(CO)2(m-Cl)}2] (1) has been tested for the industrially relevant catalytic isomerisation of a-pinene oxide (PinOx) to campholenic aldehyde (CPA) in the liquid phase. PinOx conversion and CPA selectivity are strongly influenced by the solvent employed. Complete conversion of PinOx was achieved within 1 min at 55 1C or 30 min at 35 1C using 1,2-dichloroethane as solvent, giving CPA in 68% yield. Other products included trans-carveol, iso-pinocamphone and trans-pinocarveol. The stability of 1 under the reaction conditions used was investigated by using FT-IR spectroscopy and electrospray ionisation mass spectrometry (ESI-MS) to characterise recovered solids. In the presence of air/moisture 1 undergoes oxidative decarbonylation upon dissolution to give oxomolybdenum species that are proposed to include a tetranuclear oxomolybdenum(V) complex. Conversely, ESI-MS studies of 1 dissolved in dry acetonitrile show mononuclear species of the type [IndMo(CO)2(CH3CN)n]+. The crystal structure of the ring-slipped dicarbonyl complex [(Z3-Ind)Mo(CO)2Cl(CH3CN)2] (2) (obtained after dissolution of 1 in acetonitrile) is reported.

2013Journal article

Restricted access

Assessment of a Large-Scale Unbiased Malignant Pleural Effusion Proteomics Study of a Real-Life Cohort

Publication . Zahedi, S; Carvalho, AS; Ejtehadifar, M; Beck, HC; Rei, N; Luís, A; Borralho, P; Bugalho, A; Matthiesen, R

Background: Pleural effusion (PE) is common in advanced-stage lung cancer patients and is related to poor prognosis. Identification of cancer cells is the standard method for the diagnosis of a malignant PE (MPE). However, it only has moderate sensitivity. Thus, more sensitive diagnostic tools are urgently needed. Methods: The present study aimed to discover potential protein targets to distinguish malignant pleural effusion (MPE) from other non-malignant pathologies. We have collected PE from 97 patients to explore PE proteomes by applying state-of-the-art liquid chromatography-mass spectrometry (LC-MS) to identify potential biomarkers that correlate with immunohistochemistry assessment of tumor biopsy or with survival data. Functional analyses were performed to elucidate functional differences in PE proteins in malignant and benign samples. Results were integrated into a clinical risk prediction model to identify likely malignant cases. Sensitivity, specificity, and negative predictive value were calculated. Results: In total, 1689 individual proteins were identified by MS-based proteomics analysis of the 97 PE samples, of which 35 were diagnosed as malignant. A comparison between MPE and benign PE (BPE) identified 58 differential regulated proteins after correction of the p-values for multiple testing. Furthermore, functional analysis revealed an up-regulation of matrix intermediate filaments and cellular movement-related proteins. Additionally, gene ontology analysis identified the involvement of metabolic pathways such as glycolysis/gluconeogenesis, pyruvate metabolism and cysteine and methionine metabolism. Conclusion: This study demonstrated a partial least squares regression model with an area under the curve of 98 and an accuracy of 0.92 when evaluated on the holdout test data set. Furthermore, highly significant survival markers were identified (e.g., PSME1 with a log-rank of 1.68 × 10−6 ).

2022Journal article

Open access

Use of organomolybdenum compounds for promoted hydrolysis of phosphoester bonds in aqueous media

Publication . Gomes, A.; Gamelas ou Carla A. Gamelas, Carla; Fernandes, J.; Almeida-Paz, F.; Nunes, P.; Pillinger, M.; Gonçalves, I.; Romão, C.; Abrantes, M.

The dissolution of the indenyl (Ind) complex [{(η5‐Ind)Mo(CO)2(μ‐Cl)}2] (1) in N,N′‐dimethylformamide (DMF) gives the ring‐slipped complex [(η3‐Ind)Mo(CO)2Cl(DMF)2] (2). The aerial oxidation of 2 leads to the formation of the dinuclear oxomolybdenum(V) chloride [Mo2O2(DMF)4(μ‐O)2Cl2] (3). The structures of 2 and 3·DMF have been determined by single‐crystal X‐ray diffraction. Compounds 1 and 3 were examined as promoters of phosphoester bond hydrolysis in para‐nitrophenylphosphate (pNPP), which was used as a model substrate. The reactions were performed in aqueous solution at 55 °C and followed by 1H NMR spectroscopy. For assays performed with 30–100 mol‐% of 1 or 3 relative to pNPP, both compounds promote the production of para‐nitrophenol (pNPh) from pNPP. Compound 3 is especially active in promoting the hydrolytic cleavage of the phosphoester bond (t1/2 < 80 min).

2014Journal article

Restricted access